Gram-Negative Outer Membrane Modeler (GNOMM)

Use this option to build a standard protein/membrane complex. Enter a valid PDB ID or upload a structure file of a membrane protein in PDB format to begin.

Enter PDB ID: Source:

Please select a PDB database as source for your structure. Available options are OPM (recommended), PDB-TM and RCSB PDB.

OR
Select PDB file (Maximum size 30 MB):

Use this option to simply build a lipid bilayer.

Use this option if your system needs to include elements that are not available in standard force field topology and parameters (e.g. special modifications, bound ligands, inorganic structures etc). Upload a properly processed PDB structure, its associated topology (*.top) and any other associated force field files (*.itp).

Pre-processed PDB (Max. size 30 MB):

System topology (GROMACS *.top format, e.g. "topol.top"):

Does your system require an additional topology file (GROMACS *.itp format)? No Yes

1. Choose the type of system you want to build:

2. Choose a Force Field:

Topology File	File Type