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NucEnvDB
A database of Nuclear Envelope Proteins and their Interactions
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Geranylgeranyl pyrophosphate synthase - Rattus norvegicus - NucEnvDB
Geranylgeranyl pyrophosphate synthase (
Rattus norvegicus
)
FASTA
TEXT
XML
Subcellular Location
Biology & Function
Cross-References
General Information
Protein Information
Protein Name
Geranylgeranyl pyrophosphate synthase
Accession Code
Q6F596
Gene
Ggps1
Organism
Rattus norvegicus
| Norway rat (Taxonomy:
10116
)
Part of Reference Proteome?
Yes
Sequence (Length: 300)
Show
MEKTKEKAERILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDSSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDI
YWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDIKKYCVQYLEDVGSFEYT
RYTLRELEAKAYKQIEACGGNPSLVALVKHLSKMFTEENE
Subcellular Location
Description
Show
Cytoplasm {
Curator Inference
}. Cytoplasm, perinuclear region {
By Similarity
UniProtKB:O95749
}. Cytoplasm, myofibril, sarcomere, Z line {
By Similarity
UniProtKB:O95749
}.
Position in the Nuclear Envelope
Location
Location ID
Description
Perinuclear Region
SL-0198
The perinuclear region is the cytoplasmic region just around the nucleus.
Membrane Topology
Topology
Source
Annotation Type
Unknown
UniProt
Sequence Analysis
Assigned Ontology terms
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Cellular Component
Cytoplasm
(
GO:0005737
)
Cytosol
(
GO:0005829
)
Nucleoplasm
(
GO:0005654
)
Perinuclear Region Of Cytoplasm
(
GO:0048471
)
Z Disc
(
GO:0030018
)
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Biology & Function
Description
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Catalyzes the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate, an important precursor of carotenoids and geranylated proteins. {
By Similarity
UniProtKB:O95749
}.
Assigned Ontology terms
Show
Biological Process
Farnesyl Diphosphate Biosynthetic Process
(
GO:0045337
)
Geranyl Diphosphate Biosynthetic Process
(
GO:0033384
)
Geranylgeranyl Diphosphate Biosynthetic Process
(
GO:0033386
)
Isoprenoid Biosynthetic Process
(
GO:0008299
)
Isoprenoid Metabolic Process
(
GO:0006720
)
Molecular Function
Dimethylallyltranstransferase Activity
(
GO:0004161
)
Farnesyltranstransferase Activity
(
GO:0004311
)
Geranyltranstransferase Activity
(
GO:0004337
)
Identical Protein Binding
(
GO:0042802
)
Metal Ion Binding
(
GO:0046872
)
Prenyltransferase Activity
(
GO:0004659
)
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Cross-References
Database
Links
UNIPROT
Q6F596
Pfam
PF00348
PROSITE
PS00723
PS00444
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National and Kapodistrian University of Athens
Department of Biology
Biophysics & Bioinformatics Laboratory